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nflverse/nflverse-data

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jinworks/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

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rdpeng/ProgrammingAssignment2

Repository for Programming Assignment 2 for R Programming on Coursera

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sqjin/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

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satijalab/seurat

R toolkit for single cell genomics

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broadinstitute/infercnv

Inferring CNV from Single-Cell RNA-Seq

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swirldev/swirl_courses

🎓 A collection of interactive courses for the swirl R package.

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rstudio/renv

renv: Project environments for R.

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posit-dev/skills

A collection of Claude Skills from Posit

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Rdatatable/data.table

R's data.table package extends data.frame:

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benjjneb/dada2

Accurate sample inference from amplicon data with single nucleotide resolution

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YuLab-SMU/clusterProfiler

📊 A universal enrichment tool for interpreting omics data

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stuart-lab/signac

R toolkit for the analysis of single-cell chromatin data

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